Abstract
Mycoplasma pneumoniae is a bacterial pathogen cause of upper and lower respiratory tract infections, transmitted by airborne droplets, causing outbreaks of pneumonia mainly in closed groups. According with recommendations, M. pneumoniae infections can usually be effectively treated with macrolides, which are generally considered the first-choice antibiotics in young adults. However, macrolide resistance has been observed in a number of countries. Macrolide resistance phenotypes are defined by specific point mutations in the V domain of the single-copy 23S rRNA gene of M. pneumoniae, mainly at positions 2063, 2064 and 2617 (numbering according to M. pneumoniae). Identification of appropriate single nucleotide substitutions allows effectively predicting the phenotype of resistance to macrolides, but the methods used for this purpose currently are laborious and costly. The present study is devoted to the development and validation of a new method for the determination of mutations associated with macrolide resistance in M. pneumoniae, as well as its use for the analysis of clinical specimens obtained from 31 patients with pneumonia treated in a military hospital. Two and one patients had M. pneumoniae isolates with a substitution at positions 2063 and 2064, respectively. In one case, a mixed population of wild-type and mutated M. pneumoniae isolate was observed. A rare mutation variant in the 23S rRNA gene of M. pneumoniae corresponding to the genotype C2617G was found in one patient. Our PCR-RT assay is able to discriminate between wild-type and resistant genotypes of M. pneumoniae directly from clinical specimens can be used to quickly identify type of mutations and predict possible resistance respiratory mycoplasmas to macrolide antibiotics. This assay will allow clinicians to shorten the time to the initiation of effective disease treatment.
Institute of Antimicrobial Chemotherapy, Smolensk, Russia
Institute of Antimicrobial Chemotherapy, Smolensk, Russia
Institute of Antimicrobial Chemotherapy, Smolensk, Russia
Main Military Clinical Hospital named after N.N. Burdenko, Moscow, Russia
National Research Center of Epidemiology and Microbiology named after N.F. Gamaleya, Moscow, Russia
National Research Center of Epidemiology and Microbiology named after N.F. Gamaleya, Moscow, Russia
Main Military Clinical Hospital named after N.N. Burdenko, Moscow, Russia
Institute of Antimicrobial Chemotherapy, Smolensk, Russia
-
1.
Community-acquired pneumonia in adults: practical recommendations for diagnosis, treatment and prevention. Chuchalin A.G., ed. M.: Medicina, 2010. 107 p. Russian.
-
2.
Kuchmin A.N., Akimkin V.G., Sinopalnikov A.I. Diagnostics, treatment and prevention of community-acquired pneumonia among military personnel of the Ministry of Defence of Russian Federation. Methodology guidelines GVMU MO RF. M.: GVKG im. N.N. Burdenko. 2010. 66 p. Russian.
-
3.
Zhogolev S.D., Ogarkov P.I., Zhogolev K.D., et al. Epidemiology and prevention of community-acquired pneumonia among military personnel. Voenno-medicinskij zhurnal. 2013;11:55-60. Russian.
-
4.
Bobylev A.A., Rachina S.A., Edelstein I.A., et al. Description of the outbreak of Mycoplasma pneumoniae infection in the Smolensk region. Pul'monologija. 2013;5:97-100. Russian.
-
5.
Community-acquired pneumonia in adults: practical recommendations for diagnosis, treatment and prevention. Chuchalin A.G., ed. M.: Medicina, 2010. 107 p. Russian.
-
6.
Ovchinnikov Ju.V., Zajcev A.A., Sinopalnikov A.I. Diagnosis, treatment and vaccine prophylaxis of community-acquired pneumonia among military personnel. Methodology guidelines GVMU MO RF. M.: GVKG im. N.N. Burdenko. 2015. 66 p. Russian.
-
7.
Hantz S., Garnier F., Peuchant O., et al. Multilocus variable-number tandem-repeat analysis-confirmed emergence of a macrolide resistanceassociated mutation in Mycoplasma pneumoniae during macrolide therapy for interstitial pneumonia in an immunocompromised child. J Clin Microbiol. 2012;50(10):3402-3405.
-
8.
Mulholland S., Gavranich J., Gillies M., et al. Antibiotics for community-acquired lower respiratory tract infections secondary to Mycoplasma pneumoniae in children. Cochrane Database Syst Rev. 2012;12(9):CD004875.
-
9.
Dumke R., Stolz S., Jacobs E., et al. Molecular characterization of macrolide resistance of a Mycoplasma pneumoniae strain that developed during therapy of a patient with pneumonia. International Journal of Infectious Diseases. 2014;29:197-199.
-
10.
Li X., Atkinson T., Hagood J., et al. Emerging macrolide resistance in Mycoplasma pneumoniae in children: detection and characterization of resistant isolates. Pediatric Infectious Diseases Journal. 2009;28(8):693696.
-
11.
Averbuch D., Hidalgo-Grass C., Moses A., et al. Macrolide resistance in Mycoplasma pneumoniae, Israel, 2010. Emerg Infect Dis. 2011;17(6):10791082.
-
12.
Bébéar C.M., Pereyre S. Mechanisms of drug resistance in Mycoplasma pneumoniae. Curr Drug Targets Infect Disord. 2005;5(3):263-271.
-
13.
Clinical and Laboratory Standards Institute. 2011. Methods for antimicrobial susceptibility testing of human mycoplasmas. Approved Guideline M43-A. Clinical and Laboratory Standards Institute, Wayne, PA.
-
14.
Dumke R., von Baum H., Lück P., et al. Occurrence of macrolide-resistant Mycoplasma pneumoniae strains in Germany. Clin Microbiol Infect. 2010;16(6):613-616.
-
15.
Li SL, Sun HM, Zhu BL, et al. Whole Genome Analysis Reveals New Insights into Macrolide Resistance in Mycoplasma pneumoniae. Biomed Environ Sci. 2017;30(5):343-350.
-
16.
Spuesens E., Meijer A., Bierschenk D., et al. Macrolide resistance determination and molecular typing of Mycoplasma pneumoniae in respiratory specimens collected between 1997 and 2008 in The Netherlands. J Clin Microbiol. 2012;50(6):1999-2004.
-
17.
Peuchant O., Ménard A., Renaudin H., et al. Increased macrolide resistance of Mycoplasma pneumoniae in France directly detected in clinical specimens by real-time PCR and melting curve analysis. J Antimicrob Chemother. 2009;64(1):52-58.
-
18.
Edelstein I.A., Edelstein M.V., Romanov A.V., et al. Detection of macrolideresistance mutations in 23S rRNA gene of Mycoplasma pneumoniae using a novel real-time PCR assay. Tihookeanskij medicinskij zhurnal. 2015;1:63-66. Russian.
-
19.
Edelstein I.I., Edelstein M.V., Romanov A.V., et al. Evaluation of Prevalence of Classical Fluoroquinolone Resistance Mechanisms in Chlamydia trachomatis Due to Mutations in the Topoisomerase Genes. Klinicheskaja mikrobiologija i antimikrobnaja himioterapija. 2014;16(4):301-307. Russian.
-
20.
Touati A., Peuchant O., Jensen J.S. Direct detection of macrolide resistance in Mycoplasma genitalium isolates from clinical specimens from France by use of real-time PCR and melting curve analysis. J Clin Microbiol. 2014;52(5):1549-1555.
-
21.
Kannan K., Mankin A.S. Macrolide antibiotics in the ribosome exit tunnel: species-specific binding and action. Ann N Y Acad Sci. 2011;1241:33-47.
-
22.
Wierzbowski A.K., Nichol K., Laing N. Macrolide resistance mechanisms among Streptococcus pneumoniae isolated over 6 years of Canadian Respiratory Organism Susceptibility Study (CROSS) (1998-2004). J Antimicrob Chemother. 2007;60(4):733-740.
-
23.
Descours G., Ginevra C., Jacotin N. Ribosomal Mutations Conferring Macrolide Resistance in Legionella pneumophila. Antimicrob Agents Chemother. 2017;23:61(3).
-
24.
Ishiguro N., Koseki N., Kaiho M. Regional Differences in Prevalence of Macrolide Resistance among Pediatric Mycoplasma pneumoniae Infections in Hokkaido, Japan. Jap J Infect Dis. 2016;69(3):186-190.
-
25.
Pereyre S., Goret J., Bébéar C. Mycoplasma pneumoniae: Current Knowledge on Macrolide Resistance and Treatment. Frontiers Microbiol. 2016;7:974.
-
26.
Spuesens E., Hoogenboezem T., Sluijter M., et al. Macrolide resistance determination and molecular typing of Mycoplasma pneumoniae by pyrosequencing. J Microbiol Methods. 2010;82(3):214-222.
-
27.
Mayumi M., Mitsuo N., Norio O., et al. Characterization and Molecular Analysis of Macrolide-Resistant Mycoplasma pneumoniae Clinical Isolates Obtained in Japan. Antimicrob Agents Chemother. 2004;48(12):46244630.